SNP Detail For rs10814275
1.Mapping Information
Human SNP ID rs10814275
Human chromosome chr9
Human SNP position 35758581
Pig chromosome chr1
Pig SNP position 264203751
2.Annotation Information
PubMed ID25342443
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/25342443
StudyGenome-wide association study identifies multiple loci associated with both mammographic density and breast cancer risk.
Disease/TraitMammographic density (non-dense area)
Initial sample7,600 European ancestry individuals
Replication sample343 European ancestry individuals, 1,472 Old Order Amish individuals, 8,564 individuals
Region9p13.3
Chromosome idchr9
Chromosome position35758581
Reported geneintergenic
Mapped geneNPR2
Upstream gene id
Downstream gene id
SNP gene ids4882
Upstream gene distance
Downstream gene distance
SNP risk allelers10814275-A
SNPsrs10814275
Merged0
SNP id current10814275
Contextupstream_gene_variant
Intergenic0
Allele frequency0.95
P value0.0000006
Pvalue mlog6.22184874961635
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitnon-dense area measurement, mammographic density measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006504, http://www.ebi.ac.uk/efo/EFO_0005941
Study accessionGCST002668