Human SNP ID | rs10814247 |
---|---|
Human chromosome | chr9 |
Human SNP position | 35507293 |
Pig chromosome | chr1 |
Pig SNP position | 263999542 |
PubMed ID | 25903422 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/25903422 |
Study | Genome-wide meta-analysis identifies multiple novel associations and ethnic heterogeneity of psoriasis susceptibility. |
Disease/Trait | Psoriasis |
Initial sample | 3,496 European ancestry cases, 5,186 European ancestry controls, 1,588 Chinese ancestry cases, 3,546 Chinese ancestry controls |
Replication sample | 5,134 European ancestry cases, 5,633 European ancestry controls, 5,151 Chinese ancestry cases, 5,152 Chinese ancestry controls |
Region | 9p13.3 |
Chromosome id | chr9 |
Chromosome position | 35507293 |
Reported gene | RUSC2 |
Mapped gene | RUSC2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9853 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10814247-G |
SNPs | rs10814247 |
Merged | 0 |
SNP id current | 10814247 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.385 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.08 |
%95 Ci | [1.05-1.12] |
Platform | Illumina [up to 4778154] (imputed) |
CNV | N |
Mapped trait | psoriasis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000676 |
Study accession | GCST002874 |