SNP Detail For rs10802346
1.Mapping Information
Human SNP ID rs10802346
Human chromosome chr1
Human SNP position 246209578
Pig chromosome chr10
Pig SNP position 21246573
2.Annotation Information
PubMed ID24315451
JournalJ Allergy Clin Immunol
Linkwww.ncbi.nlm.nih.gov/pubmed/24315451
StudyFraction of exhaled nitric oxide values in childhood are associated with 17q11.2-q12 and 17q12-q21 variants.
Disease/TraitFractional exhaled nitric oxide (childhood)
Initial sample5,131 European ancestry individuals, 1,155 Hispanic individuals, 2,572 individuals
Replication sampleNA
Region1q44
Chromosome idchr1
Chromosome position246209578
Reported geneSMYD3
Mapped geneSMYD3
Upstream gene id
Downstream gene id
SNP gene ids64754
Upstream gene distance
Downstream gene distance
SNP risk allelers10802346-C
SNPsrs10802346
Merged0
SNP id current10802346
Contextintron_variant
Intergenic0
Allele frequency0.15
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.076
%95 Ci[0.043-0.109] unit increase
PlatformAffymetrix, Illumina [2253077] (imputed)
CNVN
Mapped traitnitric oxide exhalation measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005536
Study accessionGCST002304