SNP Detail For rs10789491
1.Mapping Information
Human SNP ID rs10789491
Human chromosome chr1
Human SNP position 46713638
Pig chromosome chr6
Pig SNP position 152359512
2.Annotation Information
PubMed ID22095909
JournalHepatology
Linkwww.ncbi.nlm.nih.gov/pubmed/22095909
StudySerum ferritin levels are associated with a distinct phenotype of chronic hepatitis C poorly responding to pegylated interferon-alpha and ribavirin therapy.
Disease/TraitResponse to hepatitis C treatment
Initial sample707 European ancestry cases
Replication sampleNA
Region1p33
Chromosome idchr1
Chromosome position46713638
Reported geneKIAA0494
Mapped geneEFCAB14
Upstream gene id
Downstream gene id
SNP gene ids9813
Upstream gene distance
Downstream gene distance
SNP risk allelers10789491-G
SNPsrs10789491
Merged0
SNP id current10789491
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta0.312
%95 Ci[0.19-0.44] ug/L increase
PlatformNR [NR]
CNVN
Mapped traitChronic Hepatitis C infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004220
Study accessionGCST001325