SNP Detail For rs10789181
1.Mapping Information
Human SNP ID rs10789181
Human chromosome chr1
Human SNP position 65350884
Pig chromosome chr4
Pig SNP position 59375011
2.Annotation Information
PubMed ID25231870
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25231870
StudyParent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
Disease/TraitMenarche (age at onset)
Initial sampleUp to 182,413 European ancestry females
Replication sampleNA
Region1p31.3
Chromosome idchr1
Chromosome position65350884
Reported geneLEPR
Mapped geneDNAJC6
Upstream gene id
Downstream gene id
SNP gene ids9829
Upstream gene distance
Downstream gene distance
SNP risk allelers10789181-A
SNPsrs10789181
Merged0
SNP id current10789181
Contextintron_variant
Intergenic0
Allele frequency0.39
P value0.00000004
Pvalue mlog7.39794000867203
P value text
Or beta0.03
%95 Ci[0.02-0.04] unit increase
PlatformAffymetrix, Illumina [2441815] (imputed)
CNVN
Mapped traitage at menarche
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004703
Study accessionGCST002541