Human SNP ID | rs10788309 |
---|---|
Human chromosome | chr10 |
Human SNP position | 84030720 |
Pig chromosome | chr14 |
Pig SNP position | 92118467 |
PubMed ID | 26584805 |
---|---|
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Plasma omega-6 polyunsaturated fatty acid levels (gamma-linolenic acid) |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 10q23.1 |
Chromosome id | chr10 |
Chromosome position | 84030720 |
Reported gene | NR |
Mapped gene | LOC105378399 - GHITM |
Upstream gene id | 105378399 |
Downstream gene id | 27069 |
SNP gene ids | |
Upstream gene distance | 27236 |
Downstream gene distance | 108709 |
SNP risk allele | rs10788309-G |
SNPs | rs10788309 |
Merged | |
SNP id current | 10788309 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.4384 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.1001 |
%95 Ci | [0.057-0.143] unit increase |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003238 |