SNP Detail For rs1078373
1.Mapping Information
Human SNP ID rs1078373
Human chromosome chr19
Human SNP position 31310224
Pig chromosome chr6
Pig SNP position 36823304
2.Annotation Information
PubMed ID19734545
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19734545
StudyA genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
Disease/TraitCognitive performance
Initial sampleUp to 1,295 individuals
Replication sampleNA
Region19q12
Chromosome idchr19
Chromosome position31310224
Reported geneTSHZ3
Mapped geneTSHZ3
Upstream gene id
Downstream gene id
SNP gene ids57616
Upstream gene distance
Downstream gene distance
SNP risk allelers1078373-?
SNPsrs1078373
Merged0
SNP id current1078373
Contextintron_variant
Intergenic0
Allele frequency0.3707
P value0.000006
Pvalue mlog5.22184874961635
P value text(SSP)
Or beta
%95 Ci
PlatformIllumina [475971]
CNVN
Mapped traitneuropsychological test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003926
Study accessionGCST000477