SNP Detail For rs10783050
1.Mapping Information
Human SNP ID rs10783050
Human chromosome chr1
Human SNP position 96571527
Pig chromosome chr4
Pig SNP position 133006021
2.Annotation Information
PubMed ID19079260
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19079260
StudyGenome-wide association yields new sequence variants at seven loci that associate with measures of obesity.
Disease/TraitBody mass index
Initial sample72,598 European ancestry individuals, 1,160 African American individuals
Replication sampleUp to 11,036 European ancestry individuals, 32,615 individuals
Region1p21.3
Chromosome idchr1
Chromosome position96571527
Reported geneNR
Mapped geneLOC105378866 - RPL7P9
Upstream gene id105378866
Downstream gene id653702
SNP gene ids
Upstream gene distance47186
Downstream gene distance107281
SNP risk allelers10783050-C
SNPsrs10783050
Merged0
SNP id current10783050
Contextintergenic_variant
Intergenic1
Allele frequency0.36
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta2.6
%95 Ci[1.50-3.70] % SD increase
PlatformIllumina [305846]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST000296