SNP Detail For rs10776934
1.Mapping Information
Human SNP ID rs10776934
Human chromosome chr9
Human SNP position 135137855
Pig chromosome chr1
Pig SNP position 308369136
2.Annotation Information
PubMed ID22095909
JournalHepatology
Linkwww.ncbi.nlm.nih.gov/pubmed/22095909
StudySerum ferritin levels are associated with a distinct phenotype of chronic hepatitis C poorly responding to pegylated interferon-alpha and ribavirin therapy.
Disease/TraitResponse to hepatitis C treatment
Initial sample707 European ancestry cases
Replication sampleNA
Region9q34.3
Chromosome idchr9
Chromosome position135137855
Reported geneOLFM1
Mapped geneOLFM1 - LOC102723948
Upstream gene id10439
Downstream gene id102723948
SNP gene ids
Upstream gene distance16671
Downstream gene distance24606
SNP risk allelers10776934-T
SNPsrs10776934
Merged0
SNP id current10776934
Contextregulatory_region_variant
Intergenic1
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta0.281
%95 Ci[0.17-0.39] ug/L decrease
PlatformNR [NR]
CNVN
Mapped traitChronic Hepatitis C infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004220
Study accessionGCST001325