SNP Detail For rs1077667
1.Mapping Information
Human SNP ID rs1077667
Human chromosome chr19
Human SNP position 6668961
Pig chromosome chr2
Pig SNP position 72994725
2.Annotation Information
PubMed ID21833088
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/21833088
StudyGenetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis.
Disease/TraitMultiple sclerosis
Initial sample9,772 European ancestry cases, 16,849 European ancestry controls
Replication sample4,218 European ancestry cases, 7,296 European ancestry controls
Region19p13.3
Chromosome idchr19
Chromosome position6668961
Reported geneTNFSF14
Mapped geneTNFSF14
Upstream gene id
Downstream gene id
SNP gene ids8740
Upstream gene distance
Downstream gene distance
SNP risk allelers1077667-G
SNPsrs1077667
Merged0
SNP id current1077667
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000000000009
Pvalue mlog13.0457574905606
P value text
Or beta1.16
%95 Ci[1.14-1.18]
PlatformIllumina [465434]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST001198