SNP Detail For rs10776501
1.Mapping Information
Human SNP ID rs10776501
Human chromosome chr4
Human SNP position 123466324
Pig chromosome chr8
Pig SNP position 107953397
2.Annotation Information
PubMed ID26545240
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26545240
StudyGenetic Determinants of Pelvic Organ Prolapse among African American and Hispanic Women in the Women__s Health Initiative.
Disease/TraitPelvic organ prolapse
Initial sample793 African American cases, 948 African American controls, 606 Hispanic cases, 305 Hispanic controls
Replication sampleNA
Region4q28.1
Chromosome idchr4
Chromosome position123466324
Reported geneSPRY1, SPATA5
Mapped geneSPRY1 - TRC-GCA2-4
Upstream gene id10252
Downstream gene id100189197
SNP gene ids
Upstream gene distance62564
Downstream gene distance42526
SNP risk allelers10776501-A
SNPsrs10776501
Merged0
SNP id current10776501
Contextintergenic_variant
Intergenic1
Allele frequency0.69
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.38
%95 Ci
PlatformAffymetrix [at least 730985] (imputed)
CNVN
Mapped traitpelvic organ prolapse
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004710
Study accessionGCST003226