Human SNP ID | rs10776501 |
---|---|
Human chromosome | chr4 |
Human SNP position | 123466324 |
Pig chromosome | chr8 |
Pig SNP position | 107953397 |
PubMed ID | 26545240 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26545240 |
Study | Genetic Determinants of Pelvic Organ Prolapse among African American and Hispanic Women in the Women__s Health Initiative. |
Disease/Trait | Pelvic organ prolapse |
Initial sample | 793 African American cases, 948 African American controls, 606 Hispanic cases, 305 Hispanic controls |
Replication sample | NA |
Region | 4q28.1 |
Chromosome id | chr4 |
Chromosome position | 123466324 |
Reported gene | SPRY1, SPATA5 |
Mapped gene | SPRY1 - TRC-GCA2-4 |
Upstream gene id | 10252 |
Downstream gene id | 100189197 |
SNP gene ids | |
Upstream gene distance | 62564 |
Downstream gene distance | 42526 |
SNP risk allele | rs10776501-A |
SNPs | rs10776501 |
Merged | 0 |
SNP id current | 10776501 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.69 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.38 |
%95 Ci | |
Platform | Affymetrix [at least 730985] (imputed) |
CNV | N |
Mapped trait | pelvic organ prolapse |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004710 |
Study accession | GCST003226 |