SNP Detail For rs10775360
1.Mapping Information
Human SNP ID rs10775360
Human chromosome chr17
Human SNP position 70329727
Pig chromosome chr12
Pig SNP position 10524789
2.Annotation Information
PubMed ID24952745
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24952745
StudyGenetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization.
Disease/TraitQT interval
Initial sampleUp to 70,389 European ancestry individuals, up to 672 Orcadian individuals
Replication sampleUp to 33,316 European ancestry individuals
Region17q24.3
Chromosome idchr17
Chromosome position70329727
Reported geneKCNJ2
Mapped geneCALM2P1 - LOC105371884
Upstream gene id100128390
Downstream gene id105371884
SNP gene ids
Upstream gene distance87349
Downstream gene distance481744
SNP risk allelers10775360-T
SNPsrs10775360
Merged0
SNP id current10775360
Contextintron_variant
Intergenic1
Allele frequency0.292
P value0.000000000001
Pvalue mlog12
P value text
Or beta0.76
%95 Ci[0.54-0.98] unit decrease
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST002500