Human SNP ID | rs10771431 |
---|---|
Human chromosome | chr12 |
Human SNP position | 9228263 |
Pig chromosome | chr5 |
Pig SNP position | 65233845 |
PubMed ID | 22747683 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22747683 |
Study | Genetic variants associated with breast size also influence breast cancer risk. |
Disease/Trait | Breast size |
Initial sample | 16,175 European ancestry female individuals |
Replication sample | NA |
Region | 12p13.31 |
Chromosome id | chr12 |
Chromosome position | 9228263 |
Reported gene | LOC642846, LOC728715 |
Mapped gene | PZP - A2MP1 |
Upstream gene id | 5858 |
Downstream gene id | 3 |
SNP gene ids | |
Upstream gene distance | 19893 |
Downstream gene distance | 270 |
SNP risk allele | rs10771431-A |
SNPs | rs10771431 |
Merged | 0 |
SNP id current | 10771431 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.444 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.073 |
%95 Ci | [0.042-0.104] cup size decrease |
Platform | Illumina [7422970] (imputed) |
CNV | N |
Mapped trait | breast size, breast carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004884, http://www.ebi.ac.uk/efo/EFO_0000305 |
Study accession | GCST001585 |