SNP Detail For rs10771431
1.Mapping Information
Human SNP ID rs10771431
Human chromosome chr12
Human SNP position 9228263
Pig chromosome chr5
Pig SNP position 65233845
2.Annotation Information
PubMed ID22747683
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22747683
StudyGenetic variants associated with breast size also influence breast cancer risk.
Disease/TraitBreast size
Initial sample16,175 European ancestry female individuals
Replication sampleNA
Region12p13.31
Chromosome idchr12
Chromosome position9228263
Reported geneLOC642846, LOC728715
Mapped genePZP - A2MP1
Upstream gene id5858
Downstream gene id3
SNP gene ids
Upstream gene distance19893
Downstream gene distance270
SNP risk allelers10771431-A
SNPsrs10771431
Merged0
SNP id current10771431
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.444
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.073
%95 Ci[0.042-0.104] cup size decrease
PlatformIllumina [7422970] (imputed)
CNVN
Mapped traitbreast size, breast carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004884, http://www.ebi.ac.uk/efo/EFO_0000305
Study accessionGCST001585