Human SNP ID | rs10768122 |
---|---|
Human chromosome | chr11 |
Human SNP position | 35259305 |
Pig chromosome | chr2 |
Pig SNP position | 28128864 |
PubMed ID | 22561518 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22561518 |
Study | Genome-wide association analyses identify 13 new susceptibility loci for generalized vitiligo. |
Disease/Trait | Vitiligo |
Initial sample | 418 European ancestry cases, 2,810 European ancestry controls |
Replication sample | 1,377 European ancestry cases, 1,284 European ancestry controls |
Region | 11p13 |
Chromosome id | chr11 |
Chromosome position | 35259305 |
Reported gene | CD44 |
Mapped gene | SLC1A2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6506 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10768122-G |
SNPs | rs10768122 |
Merged | 0 |
SNP id current | 10768122 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.41 |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | 1.22 |
%95 Ci | [NR] |
Platform | Illumina [495821] |
CNV | N |
Mapped trait | Vitiligo |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004208 |
Study accession | GCST001509 |