SNP Detail For rs10768122
1.Mapping Information
Human SNP ID rs10768122
Human chromosome chr11
Human SNP position 35259305
Pig chromosome chr2
Pig SNP position 28128864
2.Annotation Information
PubMed ID22561518
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22561518
StudyGenome-wide association analyses identify 13 new susceptibility loci for generalized vitiligo.
Disease/TraitVitiligo
Initial sample418 European ancestry cases, 2,810 European ancestry controls
Replication sample1,377 European ancestry cases, 1,284 European ancestry controls
Region11p13
Chromosome idchr11
Chromosome position35259305
Reported geneCD44
Mapped geneSLC1A2
Upstream gene id
Downstream gene id
SNP gene ids6506
Upstream gene distance
Downstream gene distance
SNP risk allelers10768122-G
SNPsrs10768122
Merged0
SNP id current10768122
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.41
P value0.000000002
Pvalue mlog8.69897000433601
P value text
Or beta1.22
%95 Ci[NR]
PlatformIllumina [495821]
CNVN
Mapped traitVitiligo
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004208
Study accessionGCST001509