SNP Detail For rs10760706
1.Mapping Information
Human SNP ID rs10760706
Human chromosome chr9
Human SNP position 99961410
Pig chromosome chr1
Pig SNP position 269985545
2.Annotation Information
PubMed ID20596022
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/20596022
StudyGenome-wide association study in alopecia areata implicates both innate and adaptive immunity.
Disease/TraitAlopecia areata
Initial sampleUp to 1,054 European ancestry cases, 3,278 European ancestry controls
Replication sampleNA
Region9q31.1
Chromosome idchr9
Chromosome position99961410
Reported geneSTX17
Mapped geneSTX17
Upstream gene id
Downstream gene id
SNP gene ids55014
Upstream gene distance
Downstream gene distance
SNP risk allelers10760706-G
SNPsrs10760706
Merged0
SNP id current10760706
Contextintron_variant
Intergenic0
Allele frequency0.31
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta1.32
%95 Ci[1.19-1.47]
PlatformIllumina [463301]
CNVN
Mapped traitalopecia areata
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004192
Study accessionGCST000719