Human SNP ID | rs10760706 |
---|---|
Human chromosome | chr9 |
Human SNP position | 99961410 |
Pig chromosome | chr1 |
Pig SNP position | 269985545 |
PubMed ID | 20596022 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20596022 |
Study | Genome-wide association study in alopecia areata implicates both innate and adaptive immunity. |
Disease/Trait | Alopecia areata |
Initial sample | Up to 1,054 European ancestry cases, 3,278 European ancestry controls |
Replication sample | NA |
Region | 9q31.1 |
Chromosome id | chr9 |
Chromosome position | 99961410 |
Reported gene | STX17 |
Mapped gene | STX17 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55014 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10760706-G |
SNPs | rs10760706 |
Merged | 0 |
SNP id current | 10760706 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.31 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 1.32 |
%95 Ci | [1.19-1.47] |
Platform | Illumina [463301] |
CNV | N |
Mapped trait | alopecia areata |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004192 |
Study accession | GCST000719 |