SNP Detail For rs10759102
1.Mapping Information
Human SNP ID rs10759102
Human chromosome chr9
Human SNP position 9910123
Pig chromosome chr1
Pig SNP position 237000630
2.Annotation Information
PubMed ID22837378
JournalAm J Respir Crit Care Med
Linkwww.ncbi.nlm.nih.gov/pubmed/22837378
StudyGenome-wide association studies identify CHRNA5/3 and HTR4 in the development of airflow obstruction.
Disease/TraitAirflow obstruction
Initial sampleup to 3,368 European ancestry cases, up to 29,507 European ancestry controls
Replication sample331 European ancestry cases, 2,550 European ancestry controls
Region9p23
Chromosome idchr9
Chromosome position9910123
Reported genePTPRD
Mapped genePTPRD
Upstream gene id
Downstream gene id
SNP gene ids5789
Upstream gene distance
Downstream gene distance
SNP risk allelers10759102-?
SNPsrs10759102
Merged0
SNP id current10759102
Contextintron_variant
Intergenic0
Allele frequency0.67
P value0.000001
Pvalue mlog6
P value text(FEV1 65%)
Or beta1.23
%95 Ci[NR]
PlatformAffymetrix, Illumina [up to 2500000] (imputed)
CNVN
Mapped traitpulmonary function measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003892
Study accessionGCST001621