SNP Detail For rs10758593
1.Mapping Information
Human SNP ID rs10758593
Human chromosome chr9
Human SNP position 4292083
Pig chromosome chr1
Pig SNP position 243429573
2.Annotation Information
PubMed ID18840781
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/18840781
StudyFollow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes.
Disease/TraitType 1 diabetes
Initial sample563 European ancestry cases, 1,146 European ancestry controls, 483 European ancestry trios
Replication sample3,303 European ancestry cases, 4,673 European ancestry controls
Region9p24.2
Chromosome idchr9
Chromosome position4292083
Reported geneGLIS3
Mapped geneGLIS3
Upstream gene id
Downstream gene id
SNP gene ids169792
Upstream gene distance
Downstream gene distance
SNP risk allelers10758593-A
SNPsrs10758593
Merged0
SNP id current10758593
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.13
%95 Ci[1.07-1.19]
PlatformIllumina [up to 1000000]
CNVN
Mapped traittype I diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001359
Study accessionGCST000244