Human SNP ID | rs10758593 |
---|---|
Human chromosome | chr9 |
Human SNP position | 4292083 |
Pig chromosome | chr1 |
Pig SNP position | 243429573 |
PubMed ID | 18840781 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/18840781 |
Study | Follow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes. |
Disease/Trait | Type 1 diabetes |
Initial sample | 563 European ancestry cases, 1,146 European ancestry controls, 483 European ancestry trios |
Replication sample | 3,303 European ancestry cases, 4,673 European ancestry controls |
Region | 9p24.2 |
Chromosome id | chr9 |
Chromosome position | 4292083 |
Reported gene | GLIS3 |
Mapped gene | GLIS3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 169792 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10758593-A |
SNPs | rs10758593 |
Merged | 0 |
SNP id current | 10758593 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.13 |
%95 Ci | [1.07-1.19] |
Platform | Illumina [up to 1000000] |
CNV | N |
Mapped trait | type I diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001359 |
Study accession | GCST000244 |