SNP Detail For rs10745954
1.Mapping Information
Human SNP ID rs10745954
Human chromosome chr12
Human SNP position 103089316
Pig chromosome chr5
Pig SNP position 84943956
2.Annotation Information
PubMed ID21300955
JournalCirculation
Linkwww.ncbi.nlm.nih.gov/pubmed/21300955
StudyMeta-analysis of genome-wide association studies in >80 000 subjects identifies multiple loci for C-reactive protein levels.
Disease/TraitC-reactive protein levels
Initial sample63,678 European ancestry individuals 1,792 Erasmus Ruchpen individuals, 715 Orcadian individuals
Replication sample16,540 European ancestry individuals
Region12q23.2
Chromosome idchr12
Chromosome position103089316
Reported geneASCL1
Mapped geneC12orf42
Upstream gene id
Downstream gene id
SNP gene ids374470
Upstream gene distance
Downstream gene distance
SNP risk allelers10745954-A
SNPsrs10745954
Merged0
SNP id current10745954
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000000002
Pvalue mlog10.698970004336
P value text
Or beta0.039
%95 Ci[0.03-0.05] unit increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitC-reactive protein measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004458
Study accessionGCST000965