Human SNP ID | rs10740609 |
---|---|
Human chromosome | chr10 |
Human SNP position | 55031209 |
Pig chromosome | chr14 |
Pig SNP position | 103714085 |
PubMed ID | 20966902 |
---|---|
Journal | Obesity (Silver Spring) |
Link | www.ncbi.nlm.nih.gov/pubmed/20966902 |
Study | Genome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women. |
Disease/Trait | Weight |
Initial sample | 1,780 Filipino ancestry females |
Replication sample | NA |
Region | 10q21.1 |
Chromosome id | chr10 |
Chromosome position | 55031209 |
Reported gene | PCDH15 |
Mapped gene | PCDH15 - MTRNR2L5 |
Upstream gene id | 65217 |
Downstream gene id | 100463289 |
SNP gene ids | |
Upstream gene distance | 229918 |
Downstream gene distance | 567781 |
SNP risk allele | rs10740609-T |
SNPs | rs10740609 |
Merged | 0 |
SNP id current | 10740609 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.07 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 3.41 |
%95 Ci | [1.94-4.87] kg increase |
Platform | Affymetrix [2073674] (imputed) |
CNV | N |
Mapped trait | body weight |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004338 |
Study accession | GCST000837 |