SNP Detail For rs1062177
1.Mapping Information
Human SNP ID rs1062177
Human chromosome chr5
Human SNP position 151805140
Pig chromosome chr16
Pig SNP position 77426888
2.Annotation Information
PubMed ID24839885
JournalJ Am Acad Child Adolesc Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/24839885
StudyA genome-wide association meta-analysis of preschool internalizing problems.
Disease/TraitPreschool internalizing problems
Initial sample3,121 European ancestry individuals, 1,475 children from 1,031 families
Replication sampleNA
Region5q33.1
Chromosome idchr5
Chromosome position151805140
Reported geneNR
Mapped geneG3BP1
Upstream gene id
Downstream gene id
SNP gene ids10146
Upstream gene distance
Downstream gene distance
SNP risk allelers1062177-T
SNPsrs1062177
Merged0
SNP id current1062177
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.2475
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.16
%95 Ci[0.09-0.23] unit decrease
PlatformAffymetrix, Illumina [2403520] (imputed)
CNVN
Mapped traitChild Behaviour Checklist assessment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005661
Study accessionGCST002362