Human SNP ID | rs1061955 |
---|---|
Human chromosome | chr1 |
Human SNP position | 149942458 |
Pig chromosome | chr4 |
Pig SNP position | 108609877 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 1q21.2 |
Chromosome id | chr1 |
Chromosome position | 149942458 |
Reported gene | OTUD7B |
Mapped gene | OTUD7B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 56957 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1061955-A |
SNPs | rs1061955 |
Merged | 0 |
SNP id current | 1061955 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.014 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (ALT/AST) |
Or beta | 0.03 |
%95 Ci | [NR] unit increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | aspartate aminotransferase measurement, serum alanine aminotransferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004736, http://www.ebi.ac.uk/efo/EFO_0004735 |
Study accession | GCST001762 |