SNP Detail For rs1061955
1.Mapping Information
Human SNP ID rs1061955
Human chromosome chr1
Human SNP position 149942458
Pig chromosome chr4
Pig SNP position 108609877
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region1q21.2
Chromosome idchr1
Chromosome position149942458
Reported geneOTUD7B
Mapped geneOTUD7B
Upstream gene id
Downstream gene id
SNP gene ids56957
Upstream gene distance
Downstream gene distance
SNP risk allelers1061955-A
SNPsrs1061955
Merged0
SNP id current1061955
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.014
P value0.000004
Pvalue mlog5.39794000867203
P value text(ALT/AST)
Or beta0.03
%95 Ci[NR] unit increase
PlatformIllumina [899892]
CNVN
Mapped traitaspartate aminotransferase measurement, serum alanine aminotransferase measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004736, http://www.ebi.ac.uk/efo/EFO_0004735
Study accessionGCST001762