SNP Detail For rs1061147
1.Mapping Information
Human SNP ID rs1061147
Human chromosome chr1
Human SNP position 196685194
Pig chromosome chr10
Pig SNP position 24372844
2.Annotation Information
PubMed ID23326517
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23326517
StudyInsights into the genetic architecture of early stage age-related macular degeneration: a genome-wide association study meta-analysis.
Disease/TraitAge-related macular degeneration
Initial sample3,772 European ancestry cases, 16,033 European ancestry controls
Replication sample264 Asian ancestry cases, 3,926 Asian ancestry controls
Region1q31.3
Chromosome idchr1
Chromosome position196685194
Reported geneCFH
Mapped geneCFH
Upstream gene id
Downstream gene id
SNP gene ids3075
Upstream gene distance
Downstream gene distance
SNP risk allelers1061147-A
SNPsrs1061147
Merged0
SNP id current1061147
Contextsynonymous_variant
Intergenic0
Allele frequency0.37
P value7E-32
Pvalue mlog31.1549019599857
P value text
Or beta1.4
%95 Ci[1.32-1.48]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitage-related macular degeneration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001365
Study accessionGCST001814