SNP Detail For rs1055144
1.Mapping Information
Human SNP ID rs1055144
Human chromosome chr7
Human SNP position 25831489
Pig chromosome JH118567-1
Pig SNP position 176338
2.Annotation Information
PubMed ID20935629
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20935629
StudyMeta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution.
Disease/TraitWaist-hip ratio
Initial sampleUp to 77,167 European ancestry individuals
Replication sampleUp to 113,636 European ancestry individuals
Region7p15.2
Chromosome idchr7
Chromosome position25831489
Reported geneNFE2L3
Mapped geneLOC100506236
Upstream gene id
Downstream gene id
SNP gene ids100506236
Upstream gene distance
Downstream gene distance
SNP risk allelers1055144-T
SNPsrs1055144
Merged0
SNP id current1055144
Contextintergenic_variant
Intergenic0
Allele frequency0.21
P value1E-24
Pvalue mlog24
P value text
Or beta0.04
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina, Perlegen [up to 2850269] (imputed)
CNVN
Mapped traitwaist-hip ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004343
Study accessionGCST000829