SNP Detail For rs1052501
1.Mapping Information
Human SNP ID rs1052501
Human chromosome chr3
Human SNP position 41883906
Pig chromosome chr13
Pig SNP position 28294445
2.Annotation Information
PubMed ID22120009
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22120009
StudyCommon variation at 3p22.1 and 7p15.3 influences multiple myeloma risk.
Disease/TraitMultiple myeloma
Initial sample1,675 European ancestry cases, 5,903 European ancestry controls
Replication sample169 European ancestry cases, 927 European ancestry controls
Region3p22.1
Chromosome idchr3
Chromosome position41883906
Reported geneULK4
Mapped geneULK4
Upstream gene id
Downstream gene id
SNP gene ids54986
Upstream gene distance
Downstream gene distance
SNP risk allelers1052501-G
SNPsrs1052501
Merged0
SNP id current1052501
Contextmissense_variant
Intergenic0
Allele frequency0.16
P value0.00000002
Pvalue mlog7.69897000433601
P value text
Or beta1.32
%95 Ci[1.20-1.45]
PlatformIllumina [422839]
CNVN
Mapped traitmultiple myeloma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001378
Study accessionGCST001331