SNP Detail For rs10521792
1.Mapping Information
Human SNP ID rs10521792
Human chromosome chrX
Human SNP position 139035247
Pig chromosome chrX
Pig SNP position 129940173
2.Annotation Information
PubMed ID23006423
JournalBMC Cancer
Linkwww.ncbi.nlm.nih.gov/pubmed/23006423
StudyGenetic association with overall survival of taxane-treated lung cancer patients - A genome-wide association study in human lymphoblastoid cell lines followed by a clinical association study.
Disease/TraitResponse to taxane treatment (placlitaxel)
Initial sample96 African American lymphoblastoid cell lines, 96 European ancestry lymphoblastoid cell lines, 96 Han Chinese ancestry lymphoblastoid cell lines
Replication sampleNA
RegionXq27.1
Chromosome idchrX
Chromosome position139035247
Reported geneFGF13
Mapped geneFGF13
Upstream gene id
Downstream gene id
SNP gene ids2258
Upstream gene distance
Downstream gene distance
SNP risk allelers10521792-?
SNPsrs10521792
Merged0
SNP id current10521792
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 1300000]
CNVN
Mapped traitresponse to paclitaxel
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_1901555
Study accessionGCST001694