SNP Detail For rs10521222
1.Mapping Information
Human SNP ID rs10521222
Human chromosome chr16
Human SNP position 51124799
Pig chromosome chr6
Pig SNP position 30250308
2.Annotation Information
PubMed ID21300955
JournalCirculation
Linkwww.ncbi.nlm.nih.gov/pubmed/21300955
StudyMeta-analysis of genome-wide association studies in >80 000 subjects identifies multiple loci for C-reactive protein levels.
Disease/TraitC-reactive protein levels
Initial sample63,678 European ancestry individuals 1,792 Erasmus Ruchpen individuals, 715 Orcadian individuals
Replication sample16,540 European ancestry individuals
Region16q12.1
Chromosome idchr16
Chromosome position51124799
Reported geneSALL1
Mapped geneLOC101927334 - LOC105371253
Upstream gene id101927334
Downstream gene id105371253
SNP gene ids
Upstream gene distance89022
Downstream gene distance1828
SNP risk allelers10521222-C
SNPsrs10521222
Merged0
SNP id current10521222
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000000000009
Pvalue mlog12.0457574905606
P value text
Or beta0.104
%95 Ci[0.07-0.13] unit increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitC-reactive protein measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004458
Study accessionGCST000965