SNP Detail For rs10519005
1.Mapping Information
Human SNP ID rs10519005
Human chromosome chr15
Human SNP position 59419492
Pig chromosome chr1
Pig SNP position 124638793
2.Annotation Information
PubMed ID24962325
JournalDrug Alcohol Depend
Linkwww.ncbi.nlm.nih.gov/pubmed/24962325
StudyGenome-wide survival analysis of age at onset of alcohol dependence in extended high-risk COGA families.
Disease/TraitAlcohol dependence (age at onset)
Initial sample685 European ancestry cases, 1,103 European ancestry controls from 118 families
Replication sampleNA
Region15q22.2
Chromosome idchr15
Chromosome position59419492
Reported geneNR
Mapped geneFAM81A
Upstream gene id
Downstream gene id
SNP gene ids145773
Upstream gene distance
Downstream gene distance
SNP risk allelers10519005-T
SNPsrs10519005
Merged0
SNP id current10519005
Contextintron_variant
Intergenic0
Allele frequency0.46
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.26
%95 Ci[1.16-1.36]
PlatformIllumina [4058415] (imputed)
CNVN
Mapped traitage at onset, alcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004847, http://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST002477