SNP Detail For rs10518025
1.Mapping Information
Human SNP ID rs10518025
Human chromosome chr4
Human SNP position 67198722
Pig chromosome chr8
Pig SNP position 69333850
2.Annotation Information
PubMed ID19010793
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19010793
StudyGenome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
Disease/TraitMultiple sclerosis (severity)
Initial sample794 European ancestry cases, 883 European ancestry controls
Replication sampleNA
Region4q13.2
Chromosome idchr4
Chromosome position67198722
Reported geneCENPC1
Mapped geneLOC105377262 - LOC100996585
Upstream gene id105377262
Downstream gene id100996585
SNP gene ids
Upstream gene distance121337
Downstream gene distance181942
SNP risk allelers10518025-?
SNPsrs10518025
Merged0
SNP id current10518025
Contextintergenic_variant
Intergenic1
Allele frequency0.14
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci[NR]
PlatformIllumina [551642]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000266