SNP Detail For rs10516541
1.Mapping Information
Human SNP ID rs10516541
Human chromosome chr4
Human SNP position 107194065
Pig chromosome chr8
Pig SNP position 123026758
2.Annotation Information
PubMed ID17903307
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903307
StudyFramingham Heart Study genome-wide association: results for pulmonary function measures.
Disease/TraitMean forced vital capacity from 2 exams
Initial sampleUp to 1,222 individuals
Replication sampleNA
Region4q25
Chromosome idchr4
Chromosome position107194065
Reported geneintergenic
Mapped geneDKK2 - LOC102725220
Upstream gene id27123
Downstream gene id102725220
SNP gene ids
Upstream gene distance157769
Downstream gene distance92547
SNP risk allelers10516541-?
SNPsrs10516541
Merged0
SNP id current10516541
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text(meanFVC)
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitvital capacity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004312
Study accessionGCST000099