Human SNP ID | rs10515552 |
---|---|
Human chromosome | chr5 |
Human SNP position | 145659268 |
Pig chromosome | chr2 |
Pig SNP position | 153445760 |
PubMed ID | 22367966 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22367966 |
Study | Genome-wide association study identifies novel loci associated with serum level of vitamin B12 in Chinese men. |
Disease/Trait | Vitamin B12 levels |
Initial sample | 1,999 Han Chinese ancestry individuals |
Replication sample | 1,496 Chinese ancestry individuals |
Region | 5q32 |
Chromosome id | chr5 |
Chromosome position | 145659268 |
Reported gene | intergenic |
Mapped gene | PRELID2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 153768 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10515552-? |
SNPs | rs10515552 |
Merged | 0 |
SNP id current | 10515552 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | |
Or beta | 43.93 |
%95 Ci | [28.29-59.57] pg/ml increase |
Platform | Illumina [1940245] (imputed) |
CNV | N |
Mapped trait | vitamin B12 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004620 |
Study accession | GCST001424 |