SNP Detail For rs1051424
1.Mapping Information
Human SNP ID rs1051424
Human chromosome chr17
Human SNP position 59946963
Pig chromosome chr12
Pig SNP position 37430983
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region17q23.1
Chromosome idchr17
Chromosome position59946963
Reported geneRPS6KB1, NDUFB8P2, TUBD1, RNFT1
Mapped geneRPS6KB1
Upstream gene id
Downstream gene id
SNP gene ids6198
Upstream gene distance
Downstream gene distance
SNP risk allelers1051424-G
SNPsrs1051424
Merged0
SNP id current1051424
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.127
P value0.000003
Pvalue mlog5.52287874528033
P value text(Urinary free epinephrine )
Or beta0.03
%95 Ci[NR] nmol/d increase
PlatformIllumina [899892]
CNVN
Mapped traiturinary metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005116
Study accessionGCST001762