Human SNP ID | rs10513432 |
---|---|
Human chromosome | chr3 |
Human SNP position | 152817576 |
Pig chromosome | chr13 |
Pig SNP position | 101017321 |
PubMed ID | 22610502 |
---|---|
Journal | Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22610502 |
Study | Genome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients. |
Disease/Trait | Immune reponse to smallpox (secreted IL-2) |
Initial sample | Up to 512 European ancestry individuals, up to 199 African American individuals |
Replication sample | NA |
Region | 3q25.2 |
Chromosome id | chr3 |
Chromosome position | 152817576 |
Reported gene | P2RY1 |
Mapped gene | LOC102724289 - P2RY1 |
Upstream gene id | 102724289 |
Downstream gene id | 5028 |
SNP gene ids | |
Upstream gene distance | 79797 |
Downstream gene distance | 17371 |
SNP risk allele | rs10513432-G |
SNPs | rs10513432 |
Merged | 0 |
SNP id current | 10513432 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | (EA) |
Or beta | |
%95 Ci | |
Platform | Illumina [NR] |
CNV | N |
Mapped trait | response to vaccine, cytokine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004645, http://www.ebi.ac.uk/efo/EFO_0004873 |
Study accession | GCST001535 |