SNP Detail For rs10513432
1.Mapping Information
Human SNP ID rs10513432
Human chromosome chr3
Human SNP position 152817576
Pig chromosome chr13
Pig SNP position 101017321
2.Annotation Information
PubMed ID22610502
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22610502
StudyGenome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
Disease/TraitImmune reponse to smallpox (secreted IL-2)
Initial sampleUp to 512 European ancestry individuals, up to 199 African American individuals
Replication sampleNA
Region3q25.2
Chromosome idchr3
Chromosome position152817576
Reported geneP2RY1
Mapped geneLOC102724289 - P2RY1
Upstream gene id102724289
Downstream gene id5028
SNP gene ids
Upstream gene distance79797
Downstream gene distance17371
SNP risk allelers10513432-G
SNPsrs10513432
Merged0
SNP id current10513432
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.0000004
Pvalue mlog6.39794000867203
P value text(EA)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine, cytokine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645, http://www.ebi.ac.uk/efo/EFO_0004873
Study accessionGCST001535