Human SNP ID | rs10512472 |
---|---|
Human chromosome | chr17 |
Human SNP position | 35557785 |
Pig chromosome | chr12 |
Pig SNP position | 41461794 |
PubMed ID | 22139419 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/22139419 |
Study | New gene functions in megakaryopoiesis and platelet formation. |
Disease/Trait | Platelet count |
Initial sample | 47,005 European ancestry individuals, 1,661 Val Borbera individuals |
Replication sample | Up to 18,838 European ancestry individuals |
Region | 17q12 |
Chromosome id | chr17 |
Chromosome position | 35557785 |
Reported gene | SNORD7, AP2B1 |
Mapped gene | SLFN14 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 342618 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10512472-C |
SNPs | rs10512472 |
Merged | 0 |
SNP id current | 10512472 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000000000002 |
Pvalue mlog | 13.698970004336 |
P value text | |
Or beta | 3.636 |
%95 Ci | [2.7-4.57] 10^9/l increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | platelet count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004309 |
Study accession | GCST001337 |