SNP Detail For rs10509168
1.Mapping Information
Human SNP ID rs10509168
Human chromosome chr10
Human SNP position 62498069
Pig chromosome chr14
Pig SNP position 71233766
2.Annotation Information
PubMed ID25342443
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/25342443
StudyGenome-wide association study identifies multiple loci associated with both mammographic density and breast cancer risk.
Disease/TraitPercent mammographic density
Initial sample7,916 European ancestry individuals
Replication sample343 European ancestry individuals, 1,472 Old Order Amish individuals, 8,564 individuals
Region10q21.2
Chromosome idchr10
Chromosome position62498069
Reported geneZNF365
Mapped geneZNF365
Upstream gene id
Downstream gene id
SNP gene ids22891
Upstream gene distance
Downstream gene distance
SNP risk allelers10509168-T
SNPsrs10509168
Merged0
SNP id current10509168
Contextintron_variant
Intergenic0
Allele frequency0.41
P value0.000000001
Pvalue mlog9
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitmammographic density percentage, mammographic density measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006502, http://www.ebi.ac.uk/efo/EFO_0005941
Study accessionGCST002669