SNP Detail For rs10507246
1.Mapping Information
Human SNP ID rs10507246
Human chromosome chr12
Human SNP position 114358479
Pig chromosome chr14
Pig SNP position 40255891
2.Annotation Information
PubMed ID23509962
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23509962
StudyA genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
Disease/TraitVenous thromboembolism (SNP x SNP interaction)
Initial sample411 European ancestry cases, 1,228 European ancestry controls
Replication sample1,542 European ancestry cases, 1,110 European ancestry controls
Region3q26.31 x 12q24.21
Chromosome idchr3 x 12
Chromosome position175357320 x 114358479
Reported geneNR x NR
Mapped geneNAALADL2 x TBX5
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers6771725-T x rs10507246-T
SNPsrs6771725 x rs10507246
Merged0
SNP id current
Contextintron_variant x intron_variant
Intergenic
Allele frequency
P value0.000000009
Pvalue mlog8.04575749056067
P value text
Or beta2.22
%95 Ci[NR]
PlatformIllumina [291872]
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST001913