Human SNP ID | rs10507047 |
---|---|
Human chromosome | chr12 |
Human SNP position | 95210514 |
Pig chromosome | chr5 |
Pig SNP position | 92309446 |
PubMed ID | 25629512 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/25629512 |
Study | New loci and coding variants confer risk for age-related macular degeneration in East Asians. |
Disease/Trait | Exudative age-related macular degeneration |
Initial sample | 2,119 East Asian ancestry cases, 5,691 East Asian ancestry controls |
Replication sample | 4,226 East Asian ancestry cases, 10,289 East Asian ancestry controls |
Region | 12q22 |
Chromosome id | chr12 |
Chromosome position | 95210514 |
Reported gene | FGD6 |
Mapped gene | FGD6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55785 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10507047-? |
SNPs | rs10507047 |
Merged | 0 |
SNP id current | 10507047 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 1.15 |
%95 Ci | [NR] |
Platform | Illumina [4471719] (imputed) |
CNV | N |
Mapped trait | wet macular degeneration |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004683 |
Study accession | GCST002766 |