Human SNP ID | rs10507017 |
---|---|
Human chromosome | chr12 |
Human SNP position | 92771160 |
Pig chromosome | chr5 |
Pig SNP position | 94494145 |
PubMed ID | 26242244 |
---|---|
Journal | Sci Rep |
Link | www.ncbi.nlm.nih.gov/pubmed/26242244 |
Study | Association of chromosome 5q21.3 polymorphisms with the exploratory eye movement dysfunction in schizophrenia. |
Disease/Trait | Exploratory eye movement dysfunction in schizophrenia (responsive search score) |
Initial sample | 128 Han Chinese ancestry cases |
Replication sample | NA |
Region | 12q22 |
Chromosome id | chr12 |
Chromosome position | 92771160 |
Reported gene | NR |
Mapped gene | PLEKHG7 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 440107 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10507017-? |
SNPs | rs10507017 |
Merged | |
SNP id current | 10507017 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 6.212 |
%95 Ci | [3.72-8.7] unit decrease |
Platform | Illumina [498648] |
CNV | N |
Mapped trait | exploratory eye movement measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007700 |
Study accession | GCST003065 |
PubMed ID | 26242244 |
Journal | Sci Rep |
Link | www.ncbi.nlm.nih.gov/pubmed/26242244 |
Study | Association of chromosome 5q21.3 polymorphisms with the exploratory eye movement dysfunction in schizophrenia. |
Disease/Trait | Exploratory eye movement dysfunction in schizophrenia (number of eye fixations) |
Initial sample | 128 Han Chinese ancestry cases |
Replication sample | NA |
Region | 12q22 |
Chromosome id | chr12 |
Chromosome position | 92771160 |
Reported gene | NR |
Mapped gene | PLEKHG7 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 440107 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10507017-? |
SNPs | rs10507017 |
Merged | |
SNP id current | 10507017 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 17.42 |
%95 Ci | [10.51-24.33] unit decrease |
Platform | Illumina [498648] |
CNV | N |
Mapped trait | exploratory eye movement measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007700 |
Study accession | GCST003068 |