Human SNP ID | rs10504861 |
---|---|
Human chromosome | chr8 |
Human SNP position | 88535703 |
Pig chromosome | chr4 |
Pig SNP position | 53002293 |
PubMed ID | 23793025 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23793025 |
Study | Genome-wide meta-analysis identifies new susceptibility loci for migraine. |
Disease/Trait | Migraine without aura |
Initial sample | 7,107 European ancestry cases, 69,427 European ancestry controls |
Replication sample | NA |
Region | 8q21.3 |
Chromosome id | chr8 |
Chromosome position | 88535703 |
Reported gene | MMP16 |
Mapped gene | LOC100129100 - LOC105375629 |
Upstream gene id | 100129100 |
Downstream gene id | 105375629 |
SNP gene ids | |
Upstream gene distance | 49609 |
Downstream gene distance | 16995 |
SNP risk allele | rs10504861-? |
SNPs | rs10504861 |
Merged | 0 |
SNP id current | 10504861 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.84 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | 1.16 |
%95 Ci | [1.11-1.23] |
Platform | Affymetrix, Illumina [~ 2300000] (imputed) |
CNV | N |
Mapped trait | migraine disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003821 |
Study accession | GCST002078 |