SNP Detail For rs10504861
1.Mapping Information
Human SNP ID rs10504861
Human chromosome chr8
Human SNP position 88535703
Pig chromosome chr4
Pig SNP position 53002293
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine without aura
Initial sample7,107 European ancestry cases, 69,427 European ancestry controls
Replication sampleNA
Region8q21.3
Chromosome idchr8
Chromosome position88535703
Reported geneMMP16
Mapped geneLOC100129100 - LOC105375629
Upstream gene id100129100
Downstream gene id105375629
SNP gene ids
Upstream gene distance49609
Downstream gene distance16995
SNP risk allelers10504861-?
SNPsrs10504861
Merged0
SNP id current10504861
Contextintron_variant
Intergenic1
Allele frequency0.84
P value0.00000001
Pvalue mlog8
P value text
Or beta1.16
%95 Ci[1.11-1.23]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002078