SNP Detail For rs10504130
1.Mapping Information
Human SNP ID rs10504130
Human chromosome chr8
Human SNP position 51844533
Pig chromosome chr4
Pig SNP position 85368910
2.Annotation Information
PubMed ID23509962
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23509962
StudyA genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
Disease/TraitVenous thromboembolism (SNP x SNP interaction)
Initial sample411 European ancestry cases, 1,228 European ancestry controls
Replication sample1,542 European ancestry cases, 1,110 European ancestry controls
Region8q11.23 x 18p11.22
Chromosome idchr8 x 18
Chromosome position51844533 x 10447044
Reported geneNR x NR
Mapped genePCMTD1 x LOC105371988 - APCDD1
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers10504130-A x rs2847351-G
SNPsrs10504130 x rs2847351
Merged0
SNP id current
Contextintron_variant x intergenic_variant
Intergenic
Allele frequency
P value0.000000004
Pvalue mlog8.39794000867203
P value text
Or beta1.88
%95 Ci[NR]
PlatformIllumina [291872]
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST001913