SNP Detail For rs10503871
1.Mapping Information
Human SNP ID rs10503871
Human chromosome chr8
Human SNP position 30579335
Pig chromosome chr15
Pig SNP position 61919812
2.Annotation Information
PubMed ID23934736
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/23934736
StudyGenome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study.
Disease/TraitMetabolite levels (X-11787)
Initial sample1,260 African American individuals
Replication sampleNA
Region8p12
Chromosome idchr8
Chromosome position30579335
Reported geneGTF2E2
Mapped geneGTF2E2
Upstream gene id
Downstream gene id
SNP gene ids2961
Upstream gene distance
Downstream gene distance
SNP risk allelers10503871-C
SNPsrs10503871
Merged0
SNP id current10503871
Contextintron_variant
Intergenic0
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.04
%95 Ci[0.02-0.05] unit decrease
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traithydroxy-leucine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005276
Study accessionGCST002119