SNP Detail For rs10503733
1.Mapping Information
Human SNP ID rs10503733
Human chromosome chr8
Human SNP position 23676505
Pig chromosome chr14
Pig SNP position 8622803
2.Annotation Information
PubMed ID22923026
JournalCancer Epidemiol Biomarkers Prev
Linkwww.ncbi.nlm.nih.gov/pubmed/22923026
StudyEvaluating genetic risk for prostate cancer among Japanese and Latinos.
Disease/TraitProstate cancer
Initial sample1,033 Japanese ancestry cases, 1,042 Japanese ancestry controls, 1,043 Latino cases, 1,057 Latino controls
Replication sample1,583 Japanese ancestry cases, 3,386 Japanese ancestry controls, 1,854 European ancestry cases, 3,748 European ancestry controls
Region8p21.2
Chromosome idchr8
Chromosome position23676505
Reported geneNR
Mapped geneSLC25A37 - NKX3-1
Upstream gene id51312
Downstream gene id4824
SNP gene ids
Upstream gene distance103955
Downstream gene distance2188
SNP risk allelers10503733-T
SNPsrs10503733
Merged0
SNP id current10503733
Contextdownstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.00000008
Pvalue mlog7.09691001300805
P value text(Japanese and Latin American)
Or beta1.29
%95 CiNR
PlatformIllumina [528023]
CNVN
Mapped traitprostate carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001663
Study accessionGCST001646