SNP Detail For rs10502431
1.Mapping Information
Human SNP ID rs10502431
Human chromosome chr18
Human SNP position 22436012
Pig chromosome chr6
Pig SNP position 100004073
2.Annotation Information
PubMed ID25811787
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25811787
StudyModulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans.
Disease/TraitUrate levels in overweight individuals
Initial sampleup to 10,058 European ancestry male individuals, up to 7,189 European ancestry female individuals
Replication sampleNA
Region18q11.2
Chromosome idchr18
Chromosome position22436012
Reported geneCTAGE1
Mapped geneCTAGE1 - LOC105372020
Upstream gene id64693
Downstream gene id105372020
SNP gene ids
Upstream gene distance18097
Downstream gene distance22877
SNP risk allelers10502431-C
SNPsrs10502431
Merged0
SNP id current10502431
Contextintergenic_variant
Intergenic1
Allele frequency0.21
P value0.000002
Pvalue mlog5.69897000433601
P value text(men)
Or beta0.087
%95 Ci[0.052-0.122] kg/m2 decrease
PlatformAffymetrix, Illumina [at least 188473] (imputed)
CNVN
Mapped traiturate measurement, overweight body mass index status
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0005935
Study accessionGCST002829