SNP Detail For rs10501293
1.Mapping Information
Human SNP ID rs10501293
Human chromosome chr11
Human SNP position 43064544
Pig chromosome chr2
Pig SNP position 20859593
2.Annotation Information
PubMed ID19734545
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19734545
StudyA genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
Disease/TraitCognitive performance
Initial sampleUp to 1,295 individuals
Replication sampleNA
Region11p12
Chromosome idchr11
Chromosome position43064544
Reported geneAPI5
Mapped geneLOC105376642 - HNRNPKP3
Upstream gene id105376642
Downstream gene id399881
SNP gene ids
Upstream gene distance802613
Downstream gene distance196960
SNP risk allelers10501293-?
SNPsrs10501293
Merged0
SNP id current10501293
Contextnon_coding_transcript_exon_variant
Intergenic1
Allele frequency0.2494
P value0.000005
Pvalue mlog5.30102999566398
P value text(SWM strategy)
Or beta
%95 Ci
PlatformIllumina [475971]
CNVN
Mapped traitneuropsychological test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003926
Study accessionGCST000477