Human SNP ID | rs10501293 |
---|---|
Human chromosome | chr11 |
Human SNP position | 43064544 |
Pig chromosome | chr2 |
Pig SNP position | 20859593 |
PubMed ID | 19734545 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19734545 |
Study | A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB. |
Disease/Trait | Cognitive performance |
Initial sample | Up to 1,295 individuals |
Replication sample | NA |
Region | 11p12 |
Chromosome id | chr11 |
Chromosome position | 43064544 |
Reported gene | API5 |
Mapped gene | LOC105376642 - HNRNPKP3 |
Upstream gene id | 105376642 |
Downstream gene id | 399881 |
SNP gene ids | |
Upstream gene distance | 802613 |
Downstream gene distance | 196960 |
SNP risk allele | rs10501293-? |
SNPs | rs10501293 |
Merged | 0 |
SNP id current | 10501293 |
Context | non_coding_transcript_exon_variant |
Intergenic | 1 |
Allele frequency | 0.2494 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (SWM strategy) |
Or beta | |
%95 Ci | |
Platform | Illumina [475971] |
CNV | N |
Mapped trait | neuropsychological test |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003926 |
Study accession | GCST000477 |