Human SNP ID | rs10499859 |
---|---|
Human chromosome | chr7 |
Human SNP position | 80629494 |
Pig chromosome | chr9 |
Pig SNP position | 110098490 |
PubMed ID | 19454037 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19454037 |
Study | Genome-wide association study identifies single-nucleotide polymorphism in KCNB1 associated with left ventricular mass in humans: the HyperGEN Study. |
Disease/Trait | Left ventricular mass |
Initial sample | 101 European ancestry cases, 101 European ancestry controls |
Replication sample | 704 European ancestry individuals, 1,467 African American individuals |
Region | 7q21.11 |
Chromosome id | chr7 |
Chromosome position | 80629494 |
Reported gene | CD36 |
Mapped gene | CD36 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 948 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10499859-? |
SNPs | rs10499859 |
Merged | 0 |
SNP id current | 10499859 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.45 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (EA) |
Or beta | 0.091 |
%95 Ci | [NR] g/m2 increase |
Platform | Affymetrix [96258] |
CNV | N |
Mapped trait | cardiovascular measurement, left ventricular hypertrophy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004298, http://www.ebi.ac.uk/efo/EFO_0003896 |
Study accession | GCST000407 |