SNP Detail For rs10499859
1.Mapping Information
Human SNP ID rs10499859
Human chromosome chr7
Human SNP position 80629494
Pig chromosome chr9
Pig SNP position 110098490
2.Annotation Information
PubMed ID19454037
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19454037
StudyGenome-wide association study identifies single-nucleotide polymorphism in KCNB1 associated with left ventricular mass in humans: the HyperGEN Study.
Disease/TraitLeft ventricular mass
Initial sample101 European ancestry cases, 101 European ancestry controls
Replication sample704 European ancestry individuals, 1,467 African American individuals
Region7q21.11
Chromosome idchr7
Chromosome position80629494
Reported geneCD36
Mapped geneCD36
Upstream gene id
Downstream gene id
SNP gene ids948
Upstream gene distance
Downstream gene distance
SNP risk allelers10499859-?
SNPsrs10499859
Merged0
SNP id current10499859
Contextintron_variant
Intergenic0
Allele frequency0.45
P value0.000003
Pvalue mlog5.52287874528033
P value text(EA)
Or beta0.091
%95 Ci[NR] g/m2 increase
PlatformAffymetrix [96258]
CNVN
Mapped traitcardiovascular measurement, left ventricular hypertrophy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004298, http://www.ebi.ac.uk/efo/EFO_0003896
Study accessionGCST000407