Human SNP ID | rs10499559 |
---|---|
Human chromosome | chr7 |
Human SNP position | 22069841 |
Pig chromosome | chr9 |
Pig SNP position | 100364704 |
PubMed ID | 17903292 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/17903292 |
Study | A genome-wide association for kidney function and endocrine-related traits in the NHLBI__s Framingham Heart Study. |
Disease/Trait | Thyroid stimulating hormone |
Initial sample | 883 individuals |
Replication sample | NA |
Region | 7p15.3 |
Chromosome id | chr7 |
Chromosome position | 22069841 |
Reported gene | RAPGEF5 |
Mapped gene | CDCA7L - LOC102724143 |
Upstream gene id | 55536 |
Downstream gene id | 102724143 |
SNP gene ids | |
Upstream gene distance | 123917 |
Downstream gene distance | 40670 |
SNP risk allele | rs10499559-? |
SNPs | rs10499559 |
Merged | 0 |
SNP id current | 10499559 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [70897] |
CNV | N |
Mapped trait | thyroid stimulating hormone measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004748 |
Study accession | GCST000100 |