Human SNP ID | rs10499138 |
---|---|
Human chromosome | chr6 |
Human SNP position | 128171037 |
Pig chromosome | chr1 |
Pig SNP position | 38627566 |
PubMed ID | 20068591 |
---|---|
Journal | Eur J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20068591 |
Study | A genome-wide association study for age-related hearing impairment in the Saami. |
Disease/Trait | Hearing impairment |
Initial sample | 347 Finnish Saami individuals |
Replication sample | NA |
Region | 6q22.33 |
Chromosome id | chr6 |
Chromosome position | 128171037 |
Reported gene | NR |
Mapped gene | PTPRK |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5796 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10499138-A |
SNPs | rs10499138 |
Merged | 0 |
SNP id current | 10499138 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.25 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (PC2) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [83381] |
CNV | N |
Mapped trait | hearing loss |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004238 |
Study accession | GCST000566 |