Human SNP ID | rs10498792 |
---|---|
Human chromosome | chr6 |
Human SNP position | 51801833 |
Pig chromosome | chr7 |
Pig SNP position | 52085312 |
PubMed ID | 17903305 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/17903305 |
Study | A genome-wide association study of breast and prostate cancer in the NHLBI__s Framingham Heart Study. |
Disease/Trait | Prostate cancer |
Initial sample | 59 cases, 558 controls |
Replication sample | NA |
Region | 6p12.2 |
Chromosome id | chr6 |
Chromosome position | 51801833 |
Reported gene | PKHD1 |
Mapped gene | PKHD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5314 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10498792-? |
SNPs | rs10498792 |
Merged | 0 |
SNP id current | 10498792 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [70897] |
CNV | N |
Mapped trait | prostate carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001663 |
Study accession | GCST000095 |