SNP Detail For rs10498792
1.Mapping Information
Human SNP ID rs10498792
Human chromosome chr6
Human SNP position 51801833
Pig chromosome chr7
Pig SNP position 52085312
2.Annotation Information
PubMed ID17903305
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903305
StudyA genome-wide association study of breast and prostate cancer in the NHLBI__s Framingham Heart Study.
Disease/TraitProstate cancer
Initial sample59 cases, 558 controls
Replication sampleNA
Region6p12.2
Chromosome idchr6
Chromosome position51801833
Reported genePKHD1
Mapped genePKHD1
Upstream gene id
Downstream gene id
SNP gene ids5314
Upstream gene distance
Downstream gene distance
SNP risk allelers10498792-?
SNPsrs10498792
Merged0
SNP id current10498792
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitprostate carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001663
Study accessionGCST000095