SNP Detail For rs10496992
1.Mapping Information
Human SNP ID rs10496992
Human chromosome chr2
Human SNP position 145908689
Pig chromosome chr15
Pig SNP position 6303510
2.Annotation Information
PubMed ID25436638
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25436638
StudyGenetic Variants Associated with Serum Thyroid Stimulating Hormone (TSH) Levels in European Americans and African Americans from the eMERGE Network.
Disease/TraitSerum thyroid-stimulating hormone levels
Initial sample4,501 European ancestry individuals, 351 African American individuals
Replication sampleNA
Region2q22.3
Chromosome idchr2
Chromosome position145908689
Reported geneintergenic
Mapped geneLOC105373666 - LOC105373667
Upstream gene id105373666
Downstream gene id105373667
SNP gene ids
Upstream gene distance27078
Downstream gene distance295026
SNP risk allelers10496992-G
SNPsrs10496992
Merged0
SNP id current10496992
Contextintergenic_variant
Intergenic1
Allele frequency0.38
P value0.000002
Pvalue mlog5.69897000433601
P value text(EA)
Or beta0.05
%95 Ci[0.03-0.07] unit increase
PlatformIllumina [up to 905285]
CNVN
Mapped traitthyroid stimulating hormone measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004748
Study accessionGCST002707