Human SNP ID | rs10496992 |
---|---|
Human chromosome | chr2 |
Human SNP position | 145908689 |
Pig chromosome | chr15 |
Pig SNP position | 6303510 |
PubMed ID | 25436638 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25436638 |
Study | Genetic Variants Associated with Serum Thyroid Stimulating Hormone (TSH) Levels in European Americans and African Americans from the eMERGE Network. |
Disease/Trait | Serum thyroid-stimulating hormone levels |
Initial sample | 4,501 European ancestry individuals, 351 African American individuals |
Replication sample | NA |
Region | 2q22.3 |
Chromosome id | chr2 |
Chromosome position | 145908689 |
Reported gene | intergenic |
Mapped gene | LOC105373666 - LOC105373667 |
Upstream gene id | 105373666 |
Downstream gene id | 105373667 |
SNP gene ids | |
Upstream gene distance | 27078 |
Downstream gene distance | 295026 |
SNP risk allele | rs10496992-G |
SNPs | rs10496992 |
Merged | 0 |
SNP id current | 10496992 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.38 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (EA) |
Or beta | 0.05 |
%95 Ci | [0.03-0.07] unit increase |
Platform | Illumina [up to 905285] |
CNV | N |
Mapped trait | thyroid stimulating hormone measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004748 |
Study accession | GCST002707 |