SNP Detail For rs10495332
1.Mapping Information
Human SNP ID rs10495332
Human chromosome chr1
Human SNP position 232620280
Pig chromosome chr14
Pig SNP position 62323792
2.Annotation Information
PubMed ID24556642
JournalCaries Res
Linkwww.ncbi.nlm.nih.gov/pubmed/24556642
StudyGenome-wide association study of primary dentition pit-and-fissure and smooth surface caries.
Disease/TraitSmooth-surface caries
Initial sample1006 European ancestry individuals
Replication sampleNA
Region1q42.2
Chromosome idchr1
Chromosome position232620280
Reported geneSIPA1L2
Mapped geneSIPA1L2
Upstream gene id
Downstream gene id
SNP gene ids57568
Upstream gene distance
Downstream gene distance
SNP risk allelers10495332-T
SNPsrs10495332
Merged0
SNP id current10495332
Contextregulatory_region_variant
Intergenic0
Allele frequency0.0227
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta4.119
%95 Ci[NR] unit decrease
PlatformIllumina [1216189] (imputed)
CNVN
Mapped traitsmooth surface dental caries
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006339
Study accessionGCST002361