SNP Detail For rs10495285
1.Mapping Information
Human SNP ID rs10495285
Human chromosome chr1
Human SNP position 229669248
Pig chromosome chr14
Pig SNP position 65031662
2.Annotation Information
PubMed ID24483146
JournalBMC Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/24483146
StudyDiscovery of genetic biomarkers contributing to variation in drug response of cytidine analogues using human lymphoblastoid cell lines.
Disease/TraitResponse to cytadine analogues (cytosine arabinoside)
Initial sample60 European ancestry lymphoblastoid cell lines, 54 African American lymphoblastoid cell lines, 60 Han Chinese ancestry lymphoblastoid cell lines
Replication sampleNA
Region1q42.13
Chromosome idchr1
Chromosome position229669248
Reported geneKIAA0133, URB2
Mapped geneURB2 - LOC105373161
Upstream gene id9816
Downstream gene id105373161
SNP gene ids
Upstream gene distance8361
Downstream gene distance109366
SNP risk allelers10495285-?
SNPsrs10495285
Merged0
SNP id current10495285
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [1348798]
CNVN
Mapped traitresponse to cytosine arabinoside
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005655
Study accessionGCST002345